Journal: World Journal of Gastroenterology

Article Title: Emerging role of the gut microbiome in post-infectious irritable bowel syndrome: A literature review

doi: 10.3748/wjg.v29.i21.3241

Figure Lengend Snippet: Alterations of the gut microbiota observed during acute gastroenteritis and during post-infectious irritable bowel syndrome

Article Snippet: Nelson et al [ ], 2012 , 38 norovirus infection, 22 healthy controls , 16S rRNA gene 454 pyrosequencing, V3-V5 regions analysis of faecal sample , A subset (approximately 1/5) patients with norovirus had: ↓diversity, ↑ Pseudomonadota phylum, Enterobacteriaceae family , Escherichia coli diversity and virulence was not associated with norovirus infection.

Techniques: Microarray, RNA Expression, Control, Infection, Sequencing, Bacteria, Shotgun Sequencing, DNA Extraction, Clinical Proteomics

Journal: Frontiers in Microbiology

Article Title: Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

doi: 10.3389/fmicb.2014.00207

Figure Lengend Snippet: Studies evaluating the diversity of teleost-associated microbial communities .

Article Snippet: Wu et al., , Ctenopharyngodon idellus , A , Intestinal contents , 93,991 , 16S/454 Pyrosequencing , Firmicutes, Cyanobacteria, Proteobacteria, Bacteriodetes , Cellulose digesting genera present—Anoxybacillus, Leuconostoc, Clostridium, Actinomyces, Citrobacter.

Techniques: Derivative Assay, Bacteria, Transgenic Assay, Sequencing, Terminal Restriction Fragment Length Polymorphism, Staining, Isolation, Comparison, Cloning, Clone Assay

Journal: PLoS ONE

Article Title: Microbial Diversity in Hummock and Hollow Soils of Three Wetlands on the Qinghai-Tibetan Plateau Revealed by 16S rRNA Pyrosequencing

doi: 10.1371/journal.pone.0103115

Figure Lengend Snippet: Percent relative abundance of 16S rRNA genes in the pyrosequencing datasets associated with genera of methanogens and methanotrophs (mean±SD, n = 3).

Article Snippet: 454-pyrosequencing of 16S rRNA genes was used to analyze the relative abundance of major bacterial and archaeal groups.

Techniques:

Journal: Journal of Dental Research

Article Title: Newly Identified Pathogens Associated with Periodontitis

doi: 10.1177/0022034514542468

Figure Lengend Snippet: Summary of the Methodological Features of the Included Studies

Article Snippet: Griffen et al. , 2012 , 29 , , 29 , , 29 (I) , 58 (I) , 16S rDNA PCR 454 pyrosequencing. Bacteria domain.

Techniques: Nested PCR, Sequencing, Bacteria, DNA-DNA Hybridization, Hybridization, Multiplex Assay, Dot Blot, Next-Generation Sequencing